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June 6, 2013

Metabolic Model of E. coli Integrated with Protein Structures Reveals How Bacterial Growth Responds to Temperature Change

Bioengineers at the University of California, San Diego have developed a computational model of 1,366 genes in E. colithat includes 3D protein structures and has enabled them to compute the temperature sensitivity of the bacterium’s proteins.  The study, published June 7 in the journal Science, opens the door for engineers to create heat-tolerant microbial strains for production of commodity chemicals, therapeutic proteins and other industrial applications. Full Story


Bioengineer Christian Metallo Selected as 2013 Searle Scholar and Hellman Faculty Fellow

May 31, 2013

Bioengineer Christian Metallo Selected as 2013 Searle Scholar and Hellman Faculty Fellow

University of California, San Diego bioengineering professor Christian Metallo has been named a 2013 Searle Scholar.  He will receive $300,000 over the next three years to pursue his research on the role of oxygen availability in dictating how fat is produced and metabolized in the body.  This work will provide therapeutic insights into metabolic diseases such as obesity.  Metallo is one of just 15 young investigators across the United States selected from 176 applications submitted by 125 universities.Metallo is the first Searle Scholar representing the UC San Diego Jacobs School of Engineering. Full Story


UC San Diego Creates Center for Brain Activity Mapping

May 16, 2013

UC San Diego Creates Center for Brain Activity Mapping

Responding to President Barack Obama’s “grand challenge” to chart the function of the human brain in unprecedented detail, the University of California, San Diego has established the Center for Brain Activity Mapping (CBAM). The new center, under the aegis of the interdisciplinary Kavli Institute for Brain and Mind at UC San Diego, will tackle the technological and biological challenge of developing a new generation of tools to enable recording of neuronal activity throughout the brain. It will also conduct brain-mapping experiments and analyze the collected data. Full Story


Alumnus Mike Chi is Developing Better EEG Recording Equipment at Cognionics

March 11, 2013

Alumnus Mike Chi is Developing Better EEG Recording Equipment at Cognionics

When Mike Chi finished his Ph.D. in Electrical Engineering at UC San Diego in 2011, he co-founded Cognionics. One of his big goals is to put better sensor technologies into the labs of researchers and physicians who study the electrical signals produced by the brain (EEG) and heart (ECG) for a variety of basic research and medical applications such as diagnosing cardiac disorders or conducting high-resolution brain imaging on freely moving subjects. Full Story


What is the Story Behind the Research Expo Gold Squares?

March 11, 2013

What is the Story Behind the Research Expo Gold Squares?

The gold squares on the Research Expo 2013 postcards…what are they? The gold squares are ceramic packages that house experimental circuits developed in the lab of bioengineering professor Gert Cauwenberghs at the UC San Diego Jacobs School of Engineering. The research is aimed at developing new circuits that increase the speed and decrease the energy required to wirelessly transfer biological data—such as ECG signals from the heart and EEG signals from the brain—from sensors worn on the body to nearby data collectors.  Full Story


International Consortium Builds 'Google Map' of Human Metabolism

March 4, 2013

International Consortium Builds 'Google Map' of Human Metabolism

Building on earlier pioneering work by researchers at the University of California, San Diego, an international consortium of university researchers has produced the most comprehensive virtual reconstruction of human metabolism to date. Scientists could use the model, known as Recon 2, to identify causes of and new treatments for diseases like cancer, diabetes and even psychiatric and neurodegenerative disorders. Full Story


New injectable hydrogel encourages regeneration and improves functionality after a heart attack

February 20, 2013

New injectable hydrogel encourages regeneration and improves functionality after a heart attack

University of California, San Diego bioengineers have demonstrated in a study in pigs that a new injectable hydrogel can repair damage from heart attacks, help the heart grow new tissue and blood vessels, and get the heart moving closer to how a healthy heart should. The results of the study were published Feb. 20 in Science Translational Medicine and clear the way for clinical trials to begin this year in Europe. The gel is injected through a catheter without requiring surgery or general anesthesia -- a less invasive procedure for patients. Full Story


Shu Chien Named San Diego  Festival of Science & Engineering Chief Engineer

February 7, 2013

Shu Chien Named San Diego Festival of Science & Engineering Chief Engineer

At the 2011 National Medal of Science ceremony in which Shu Chien accepted his award, President Obama stressed the importance of encouraging young students to pursue STEM (Science, Technology, Engineering and Mathematics) fields. Chien, a UC San Diego professor of bioengineering and medicine and director of the Institute of Engineering in Medicine, echoed the sentiment: “The strength of our country depends on science and engineering,” he said. Now, Chien is serving as the chief engineer of the 2013 San Diego Festival of Science & Engineering, taking place March 16 to 23. Full Story


Blocking Digestive Enzymes May Reverse Shock, Stop Multiorgan Failure

January 23, 2013

Blocking Digestive Enzymes May Reverse Shock, Stop Multiorgan Failure

New research from the University of California, San Diego published in the Jan. 23 issue of Science Translational Medicine moves researchers closer to understanding and developing treatments for shock, sepsis and multiorgan failure. Collectively, these maladies represent a major unmet medical need: they are the number one cause of mortality in intensive care units in the United States, with hundreds of thousands of deaths annually. There is currently no treatment for these conditions in spite of many clinical trials Full Story


Genomic 'Hotspots' Offer Clues to Causes of Autism, Other Disorders

January 7, 2013

Genomic 'Hotspots' Offer Clues to Causes of Autism, Other Disorders

An international team, led by researchers from the University of California, San Diego School of Medicine, has discovered that “random” mutations in the genome are not quite so random after all. Their study, to be published in the journal Cell on December 21, shows that the DNA sequence in some regions of the human genome is quite volatile and can mutate ten times more frequently than the rest of the genome. Genes that are linked to autism and a variety of other disorders have a particularly strong tendency to mutate. Clusters of mutations or “hotspots” are not unique to the autism genome but instead are an intrinsic characteristic of the human genome, according to principal investigator Jonathan Sebat, PhD, professor of psychiatry and cellular and molecule medicine, and chief of the Beyster Center for Molecular Genomics of Neuropsychiatric Diseases at UC San Diego. “Our findings provide some insights into the underlying basis of autism—that, surprisingly, the genome is not shy about tinkering with its important genes” said Sebat.  “To the contrary, disease-causing genes tend to be hypermutable.” Full Story